STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cni-aps-1AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (157 aa)    
Predicted Functional Partners:
Cni-apb-1
AP complex subunit beta.
    
 0.998
B9Z55_002255
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.998
Cni-apg-1
AP-1 complex subunit gamma.
    
 0.998
B9Z55_003949
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.996
B9Z55_010554
B2-adapt-app_C domain-containing protein.
    
 0.980
B9Z55_027859
Adaptin_N domain-containing protein.
    
 0.915
B9Z55_022626
Alpha_adaptinC2 domain-containing protein.
    
 0.915
Cni-apa-2
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
 0.915
Cni-apd-3
AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.
    
 0.915
Cni-chc-1
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.913
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.