STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z55_020304Hflx-type G domain-containing protein. (465 aa)    
Predicted Functional Partners:
Cni-mrpl-32
Uncharacterized protein.
   
 
 0.974
Cni-mrpl-9
RIBOSOMAL_L9 domain-containing protein.
   
 
 0.968
Cni-mrpl-19
Uncharacterized protein.
   
 
 0.965
B9Z55_011556
Uncharacterized protein.
   
   0.961
Cni-mrpl-20
Uncharacterized protein.
   
   0.956
Cni-mrpl-17
Uncharacterized protein.
   
   0.956
B9Z55_010704
Uncharacterized protein.
   
   0.954
Cni-rpl-12
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.948
Cni-mrpl-11
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.948
Cni-rpl-23
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.945
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.