STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cni-xbx-1Uncharacterized protein. (370 aa)    
Predicted Functional Partners:
B9Z55_010238
Uncharacterized protein.
    
 0.992
Cni-dyrb-1
Dynein light chain roadblock.
    
 0.989
Cni-Y50C1A.2
Uncharacterized protein.
    
 0.978
Cni-dli-1
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
   
 
0.973
Cni-dyci-1
Uncharacterized protein.
    
 0.962
Cni-osm-5
Uncharacterized protein.
  
 0.937
Cni-dylt-2
Uncharacterized protein.
   
 0.935
B9Z55_001638
Dynein_C domain-containing protein.
  
 
 0.930
Cni-osm-6
Uncharacterized protein.
  
  
 0.929
B9Z55_000152
DHC_N2 domain-containing protein.
  
 
 0.926
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.