STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z55_011987Uncharacterized protein. (74 aa)    
Predicted Functional Partners:
Cni-T20H4.5
Uncharacterized protein.
    
 0.962
B9Z55_016314
Uncharacterized protein.
   
 0.961
Cni-nuo-5
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
    
 0.961
Cni-nduf-7
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
    
 0.957
Cni-C16A3.5
Uncharacterized protein; Belongs to the complex I LYR family.
   
 0.950
Cni-Y51H1A.3
Uncharacterized protein.
    
 0.946
Cni-C33A12.1
Uncharacterized protein.
   
 0.939
Cni-lpd-5
Uncharacterized protein.
   
 0.936
Cni-nuo-3
Uncharacterized protein.
   
 0.931
Cni-nuo-1
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
    
 0.928
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.