STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z55_012462Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
Cni-Y52B11A.3
Uncharacterized protein.
    
 0.669
Cni-ZK596.1
DUF148 domain-containing protein.
    
 0.466
B9Z55_019843
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
    
 0.430
B9Z55_019845
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
    
 0.430
Cni-eif-3.J
Uncharacterized protein.
    
 
 0.426
B9Z55_023862
Uncharacterized protein.
     
 0.424
B9Z55_023900
Uncharacterized protein.
     
 0.424
B9Z55_024240
Uncharacterized protein.
     
 0.424
B9Z55_024851
Uncharacterized protein.
     
 0.424
B9Z55_024854
Uncharacterized protein.
     
 0.424
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.