STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cni-bicd-1Uncharacterized protein. (746 aa)    
Predicted Functional Partners:
Cni-dnc-2
Uncharacterized protein.
    
 0.987
Cni-dnc-1
CAP-Gly domain-containing protein.
    
 0.983
Cni-dli-1
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
    
 0.981
Cni-egal-1
3'-5' exonuclease domain-containing protein.
    
 
 0.976
Cni-dyci-1
Uncharacterized protein.
    
 0.965
B9Z55_027441
Uncharacterized protein.
    
 0.958
B9Z55_022767
Uncharacterized protein.
    
 0.958
Cni-H35B03.1
Uncharacterized protein.
    
 0.902
Cni-C56E6.2
Uncharacterized protein.
    
 0.902
Cni-dhc-1
Uncharacterized protein.
    
 0.890
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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