STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cni-F25H8.1SAM-dependent MTase TRM10-type domain-containing protein. (333 aa)    
Predicted Functional Partners:
Cni-ard-1
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.909
B9Z55_002018
Uncharacterized protein.
   
 0.876
Cni-F20B10.3
Uncharacterized protein.
      
 0.806
Cni-Y102E9.2
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.803
Cni-W02B12.10
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
   
 
 0.779
Cni-B0041.8
Uncharacterized protein.
   
 
 0.779
Cni-pus-1
PseudoU_synth_1 domain-containing protein.
   
 
 0.744
Cni-tag-124
PseudoU_synth_1 domain-containing protein.
   
 
 0.735
B9Z55_018077
Uncharacterized protein.
      
 0.730
Cni-mrps-31
Uncharacterized protein.
   
 
 0.720
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.