STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cni-rpl-34Uncharacterized protein. (110 aa)    
Predicted Functional Partners:
Cni-rpl-38
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 
 0.999
Cni-rps-30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
Cni-rps-27
Uncharacterized protein.
   
 
 0.999
Cni-rpl-28
Ribosomal_L28e domain-containing protein.
   
 0.999
Cni-rps-16
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
Cni-rpl-2
Ribosomal_L2_C domain-containing protein.
  
 0.999
Cni-rps-18
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.999
Cni-rpl-18
Ribosomal_L18e/L15P domain-containing protein.
  
 0.999
Cni-rps-25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.999
Cni-rps-4
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 
 0.999
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.