STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cni-best-15Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (503 aa)    
Predicted Functional Partners:
B9Z55_026373
Uncharacterized protein.
      
 0.756
B9Z55_011732
Uncharacterized protein.
      
 0.756
Cni-ttyh-1
Protein tweety homolog; Probable chloride channel; Belongs to the tweety family.
      
 0.731
Cni-aqp-6
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.694
Cni-kcc-1
Uncharacterized protein.
    
 
 0.595
B9Z55_017960
Uncharacterized protein.
      
 0.541
Cni-best-14
Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family.
  
  
 
0.458
Cni-best-23
Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family.
  
  
 
0.456
Cni-best-4
Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family.
  
  
 
0.445
Cni-best-16
Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family.
  
  
 
0.444
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.