STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cni-K11H12.1Uncharacterized protein; Belongs to the BolA/IbaG family. (112 aa)    
Predicted Functional Partners:
Cni-Y105E8A.11
Uncharacterized protein; Belongs to the BolA/IbaG family.
   
 
 0.990
Cni-glrx-3
Uncharacterized protein.
  
 
 0.963
Cni-T12D8.10
Uncharacterized protein; Belongs to the BolA/IbaG family.
   
 
 0.960
Cni-glrx-5
Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
  
 
 0.931
B9Z55_020590
Glutaredoxin domain-containing protein.
  
 
 0.917
Cni-T20B12.7
Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the cytosolic Fe-S scaffold complex. Electrons are transferred from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Together with the diflavin oxidoreductase, also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RN [...]
    
 
 0.917
Cni-lpd-8
Nfu_N domain-containing protein.
  
 
 0.679
Cni-tin-9.1
zf-Tim10_DDP domain-containing protein.
   
  
 0.676
Cni-Y39B6A.3
Fe-S_biosyn domain-containing protein.
   
 
 0.649
Cni-M01F1.3
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
   
 
 0.611
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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