STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cni-nhr-146Uncharacterized protein. (373 aa)    
Predicted Functional Partners:
Cni-C39H7.4
Uncharacterized protein.
      
 0.721
Cni-hpo-15
Amino_oxidase domain-containing protein.
      
 0.677
Cni-gei-8
Uncharacterized protein.
    
 0.673
Cni-aha-1
Uncharacterized protein.
    
 0.663
Cni-aap-1
Uncharacterized protein.
  
 
  0.595
B9Z55_026809
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.592
B9Z55_026811
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.592
Cni-ZC395.10
CS domain-containing protein.
   
  0.563
Cni-nep-17
Uncharacterized protein.
      
 0.560
B9Z55_015954
ETS domain-containing protein.
  
 
   0.551
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.