STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cni-Y74C10AL.2Uncharacterized protein. (157 aa)    
Predicted Functional Partners:
Cni-C30B5.2
Uncharacterized protein.
   
 
 0.990
Cni-abtm-1
Uncharacterized protein.
      
 0.731
Cni-Y54E10A.11
RING-type domain-containing protein.
      
 0.727
Cni-F38B6.4
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
      
 0.626
Cni-ubc-14
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.601
Cni-Y39B6A.3
Fe-S_biosyn domain-containing protein.
      
 0.560
Cni-Y73F8A.27
2Fe-2S ferredoxin-type domain-containing protein.
      
 0.560
Cni-Y62E10A.6
NADPH:adrenodoxin oxidoreductase, mitochondrial.
      
 0.560
B9Z55_022265
IRK_C domain-containing protein.
      
 0.559
Cni-irk-2
Uncharacterized protein.
      
 0.559
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.