STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z55_000851Ubiquitin-like domain-containing protein. (73 aa)    
Predicted Functional Partners:
Cni-F19F10.9
Uncharacterized protein.
    
 0.968
Cni-mfap-1
MFAP1 domain-containing protein.
    
 0.966
Cni-prp-38
PRP38_assoc domain-containing protein.
    
 0.962
Cni-dve-1
Uncharacterized protein.
    
 0.943
Cni-prp-8
MPN domain-containing protein.
    
 
 0.918
Cni-Y54G2A.75
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
   
  0.915
Cni-snu-23
U1-type domain-containing protein.
    
 0.901
Cni-cdc-5L
Uncharacterized protein.
    
 0.899
Cni-T11G6.8
Uncharacterized protein.
   
  0.897
Cni-F33H1.3
Uncharacterized protein.
    
  0.889
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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