STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746255_00655Unannotated protein. (525 aa)    
Predicted Functional Partners:
GCA_000746255_01616
Unannotated protein.
 
   0.964
GCA_000746255_01614
Unannotated protein.
 
 
   0.954
GCA_000746255_01615
Unannotated protein.
 
     0.790
GCA_000746255_00656
Unannotated protein.
       0.776
GCA_000746255_00654
Unannotated protein.
       0.773
GCA_000746255_01613
Unannotated protein.
 
   
 0.715
GCA_000746255_00651
Unannotated protein.
       0.697
GCA_000746255_00652
Unannotated protein.
       0.697
GCA_000746255_00653
Unannotated protein.
       0.697
GCA_000746255_01009
Unannotated protein.
 
     0.663
Your Current Organism:
Thermodesulfobacterium hydrogeniphilum
NCBI taxonomy Id: 161156
Other names: DSM 14290, JCM 11239, T. hydrogeniphilum, Thermodesulfobacterium hydrogeniphilum Jeanthon et al. 2002, strain SL6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.