STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB98191.1Membrane-bound serine protease (ClpP class). (449 aa)    
Predicted Functional Partners:
SDB98216.1
Uncharacterized protein YqfA, UPF0365 family.
 
  
 0.989
SDB98244.1
Hypothetical protein.
  
  
 0.869
SDB98270.1
Sporulation protein YqfC.
 
     0.601
SDB98296.1
Similar to stage IV sporulation protein.
       0.540
SDB98324.1
Phosphate starvation-inducible protein PhoH.
       0.540
SDB98166.1
Hypothetical protein.
       0.487
rpsU
SSU ribosomal protein S21P; Belongs to the bacterial ribosomal protein bS21 family.
       0.426
SDB98356.1
Hypothetical protein.
       0.410
ybeY
Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.410
SDB98408.1
Undecaprenol kinase/diacylglycerol kinase (ATP).
       0.410
Your Current Organism:
Pelagirhabdus alkalitolerans
NCBI taxonomy Id: 1612202
Other names: Amphibacillus sp. S5, CGMCC 1.15177, KCTC 33632, P. alkalitolerans, Pelagirhabdus alkalitolerans Sultanpuram et al. 2016, strain S5
Server load: low (18%) [HD]