STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB94951.1Choline/glycine/proline betaine transport protein; Belongs to the BCCT transporter (TC 2.A.15) family. (628 aa)    
Predicted Functional Partners:
SDC65405.1
Glycine betaine/proline transport system ATP-binding protein.
     
 0.680
SDC65234.1
Glycine betaine/proline transport system substrate-binding protein.
    
 0.558
SDC65270.1
Glycine betaine/proline transport system substrate-binding protein.
    
 0.558
SDC65309.1
Glycine betaine/proline transport system substrate-binding protein.
    
 0.558
SDB94966.1
Transglycosylase SLT domain-containing protein.
       0.515
SDB80867.1
Zinc-ribbon domain-containing protein.
     
 0.506
SDC65354.1
Glycine betaine/proline transport system permease protein/glycine betaine/proline transport system substrate-binding protein.
     
 0.506
SDC28871.1
Peptide/nickel transport system substrate-binding protein.
    
  0.487
SDC36270.1
Peptide/nickel transport system substrate-binding protein.
    
  0.487
SDC36303.1
Peptide/nickel transport system permease protein.
    
  0.487
Your Current Organism:
Pelagirhabdus alkalitolerans
NCBI taxonomy Id: 1612202
Other names: Amphibacillus sp. S5, CGMCC 1.15177, KCTC 33632, P. alkalitolerans, Pelagirhabdus alkalitolerans Sultanpuram et al. 2016, strain S5
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