STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC44106.1Gas vesicle protein. (138 aa)    
Predicted Functional Partners:
SDB95429.1
Protein of unknown function.
 
    0.740
SDC55216.1
Cell division protein DivIC.
 
     0.734
SDB96001.1
Rod shape-determining protein MreD.
  
     0.730
SDC59261.1
Tetratricopeptide repeat-containing protein.
 
    0.721
SDC44253.1
ABC-2 type transport system permease protein.
 
     0.716
SDB99149.1
Hypothetical protein.
  
     0.715
SDB97378.1
Protein of unknown function.
  
     0.692
SDB99117.1
Hypothetical protein.
  
     0.660
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
     0.655
SDC00128.1
Stage III sporulation protein AH.
  
     0.654
Your Current Organism:
Pelagirhabdus alkalitolerans
NCBI taxonomy Id: 1612202
Other names: Amphibacillus sp. S5, CGMCC 1.15177, KCTC 33632, P. alkalitolerans, Pelagirhabdus alkalitolerans Sultanpuram et al. 2016, strain S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.