STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APU20529.1ABC-type multidrug transport system, ATPase component. (328 aa)    
Predicted Functional Partners:
APU20528.1
ABC-type multidrug transport system, permease component.
 
  
 0.939
APU20530.1
Hypothetical protein.
   
   0.783
APU22980.1
ABC-type multidrug transport system, permease component.
  
    0.471
APU22952.1
ABC-type multidrug transport system, permease component.
  
    0.457
mshC
cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily.
  
     0.435
APU20533.1
FeS assembly protein SufD.
       0.429
APU20531.1
Putative transcriptional regulator.
       0.428
APU20532.1
FeS assembly protein SufB.
       0.428
APU20534.1
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase.
       0.417
Your Current Organism:
Actinoalloteichus sp. GBA12924
NCBI taxonomy Id: 1612551
Other names: A. sp. GBA129-24, Actinoalloteichus sp. GBA129-24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.