STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APU21994.1Entner-Doudoroff aldolase. (225 aa)    
Predicted Functional Partners:
APU21998.1
Sugar kinase, ribokinase.
 
 
 0.984
APU22630.1
Sugar kinase, ribokinase.
 
 
 0.975
APU22309.1
Sugar kinase, ribokinase.
 
 
 0.972
APU20697.1
Sugar kinase, ribokinase.
 
 
 0.970
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
 
 0.945
APU23668.1
Malate synthase A; Belongs to the malate synthase family.
     
 0.903
APU18899.1
Isocitrate lyase.
     
 0.902
APU23970.1
FAD/FMN-dependent dehydrogenase.
   
 
 0.902
APU20075.1
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.
     
  0.900
APU20498.1
Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.835
Your Current Organism:
Actinoalloteichus sp. GBA12924
NCBI taxonomy Id: 1612551
Other names: A. sp. GBA129-24, Actinoalloteichus sp. GBA129-24
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