STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBZ95806.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (736 aa)    
Predicted Functional Partners:
OBZ95804.1
Chromophore lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.891
OBZ95896.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.710
OBZ95117.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.581
OBZ93091.1
Ferrichrome transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.521
OBZ95897.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.509
OBZ95057.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.504
OBZ95904.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.492
OBZ95805.1
Antibiotic synthesis protein MbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.480
OBZ95808.1
POT family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.468
OBZ94825.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.465
Your Current Organism:
Pararhizobium polonicum
NCBI taxonomy Id: 1612624
Other names: CFBP 8359, LMG 28610, LMG:28610, P. polonicum, Pararhizobium polonicum Pulawska et al. 2016, Pararhizobium sp. AL5.1.8, Pararhizobium sp. CP17.2.1, Pararhizobium sp. CP3.5, Pararhizobium sp. F5.1, Pararhizobium sp. F5.3, strain F5.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.