Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_002119645_02148 | adhE | GCA_002119645_02148 | GCA_002119645_00333 | Unannotated protein. | Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.477 |
GCA_002119645_02148 | iolS | GCA_002119645_02148 | GCA_002119645_00069 | Unannotated protein. | Unannotated protein. | 0.585 |
adhE | GCA_002119645_02148 | GCA_002119645_00333 | GCA_002119645_02148 | Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Unannotated protein. | 0.477 |
adhE | iolS | GCA_002119645_00333 | GCA_002119645_00069 | Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Unannotated protein. | 0.412 |
brnQ | iolS | GCA_002119645_00068 | GCA_002119645_00069 | Unannotated protein; Component of the transport system for branched-chain amino acids. | Unannotated protein. | 0.545 |
brnQ | trmA | GCA_002119645_00068 | GCA_002119645_00067 | Unannotated protein; Component of the transport system for branched-chain amino acids. | Unannotated protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.553 |
iolS | GCA_002119645_02148 | GCA_002119645_00069 | GCA_002119645_02148 | Unannotated protein. | Unannotated protein. | 0.585 |
iolS | adhE | GCA_002119645_00069 | GCA_002119645_00333 | Unannotated protein. | Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.412 |
iolS | brnQ | GCA_002119645_00069 | GCA_002119645_00068 | Unannotated protein. | Unannotated protein; Component of the transport system for branched-chain amino acids. | 0.545 |
iolS | trmA | GCA_002119645_00069 | GCA_002119645_00067 | Unannotated protein. | Unannotated protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.402 |
trmA | brnQ | GCA_002119645_00067 | GCA_002119645_00068 | Unannotated protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Unannotated protein; Component of the transport system for branched-chain amino acids. | 0.553 |
trmA | iolS | GCA_002119645_00067 | GCA_002119645_00069 | Unannotated protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Unannotated protein. | 0.402 |