Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LF130101_2093 | LF130101_2096 | GCA_002119645_02238 | GCA_002119645_02241 | Unannotated protein. | Unannotated protein. | 0.557 |
LF130101_2093 | LFER_38 | GCA_002119645_02238 | GCA_002119645_02237 | Unannotated protein. | Unannotated protein. | 0.777 |
LF130101_2093 | LFER_40 | GCA_002119645_02238 | GCA_002119645_02239 | Unannotated protein. | Unannotated protein. | 0.952 |
LF130101_2093 | mpg | GCA_002119645_02238 | GCA_002119645_02240 | Unannotated protein. | Unannotated protein; Belongs to the DNA glycosylase MPG family. | 0.774 |
LF130101_2096 | LF130101_2093 | GCA_002119645_02241 | GCA_002119645_02238 | Unannotated protein. | Unannotated protein. | 0.557 |
LF130101_2096 | LFER_315 | GCA_002119645_02241 | GCA_002119645_01166 | Unannotated protein. | Unannotated protein. | 0.711 |
LF130101_2096 | LFER_38 | GCA_002119645_02241 | GCA_002119645_02237 | Unannotated protein. | Unannotated protein. | 0.557 |
LF130101_2096 | LFER_40 | GCA_002119645_02241 | GCA_002119645_02239 | Unannotated protein. | Unannotated protein. | 0.558 |
LF130101_2096 | mpg | GCA_002119645_02241 | GCA_002119645_02240 | Unannotated protein. | Unannotated protein; Belongs to the DNA glycosylase MPG family. | 0.734 |
LF130101_2096 | rbsK | GCA_002119645_02241 | GCA_002119645_02106 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.437 |
LFER_315 | LF130101_2096 | GCA_002119645_01166 | GCA_002119645_02241 | Unannotated protein. | Unannotated protein. | 0.711 |
LFER_38 | LF130101_2093 | GCA_002119645_02237 | GCA_002119645_02238 | Unannotated protein. | Unannotated protein. | 0.777 |
LFER_38 | LF130101_2096 | GCA_002119645_02237 | GCA_002119645_02241 | Unannotated protein. | Unannotated protein. | 0.557 |
LFER_38 | LFER_40 | GCA_002119645_02237 | GCA_002119645_02239 | Unannotated protein. | Unannotated protein. | 0.776 |
LFER_38 | mpg | GCA_002119645_02237 | GCA_002119645_02240 | Unannotated protein. | Unannotated protein; Belongs to the DNA glycosylase MPG family. | 0.774 |
LFER_40 | LF130101_2093 | GCA_002119645_02239 | GCA_002119645_02238 | Unannotated protein. | Unannotated protein. | 0.952 |
LFER_40 | LF130101_2096 | GCA_002119645_02239 | GCA_002119645_02241 | Unannotated protein. | Unannotated protein. | 0.558 |
LFER_40 | LFER_38 | GCA_002119645_02239 | GCA_002119645_02237 | Unannotated protein. | Unannotated protein. | 0.776 |
LFER_40 | mpg | GCA_002119645_02239 | GCA_002119645_02240 | Unannotated protein. | Unannotated protein; Belongs to the DNA glycosylase MPG family. | 0.778 |
mpg | LF130101_2093 | GCA_002119645_02240 | GCA_002119645_02238 | Unannotated protein; Belongs to the DNA glycosylase MPG family. | Unannotated protein. | 0.774 |
page 1 of 2