STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT64504.1ABC transporter permease. (338 aa)    
Predicted Functional Partners:
GAT64505.1
Sugar ABC transporter substrate-binding protein.
  0.999
GAT64503.1
ABC transporter permease.
  0.991
GAT65938.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.991
GAT64499.1
ABC transporter; Belongs to the ABC transporter superfamily.
 
 0.980
GAT66868.1
Sugar ABC transporter permease.
  0.943
GAT67056.1
Sugar ABC transporter permease.
  0.942
GAT67211.1
Sugar ABC transporter permease.
  0.942
GAT69831.1
Sugar ABC transporter permease.
  0.942
GAT66657.1
Sugar ABC transporter substrate-binding protein.
 0.940
GAT68145.1
Sugar ABC transporter permease.
 
  0.905
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.