STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT64586.1Cell filamentation protein Fic. (281 aa)    
Predicted Functional Partners:
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
   0.603
GAT68509.1
Heat-shock protein Hsp70.
    
   0.603
GAT68592.1
Molecular chaperone-like protein.
    
   0.603
GAT69112.1
DNA-binding protein.
  
     0.580
GAT71476.1
DNA primase.
      
 0.572
GAT64418.1
Peptidase S8.
  
     0.565
GAT64645.1
Lantibiotic ABC transporter.
  
     0.554
GAT64587.1
Cytochrome P450.
       0.519
GAT70295.1
Ankyrin domain-containing protein.
  
   
 0.505
GAT66224.1
Choline kinase.
  
     0.490
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.