STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT64671.1Lipoprotein. (490 aa)    
Predicted Functional Partners:
GAT64670.1
Phosphopeptide-binding protein.
 
     0.949
GAT64667.1
Serine/threonine protein kinase.
 
     0.938
GAT64668.1
Serine/threonine phosphatase.
 
     0.937
GAT64669.1
VWA domain-containing protein.
 
     0.937
GAT64666.1
Hypothetical protein.
       0.765
GAT64672.1
Glutamate-binding protein.
 
     0.740
GAT70265.1
Cell division protein FtsK.
  
     0.700
GAT65174.1
Hypothetical protein.
  
     0.631
GAT68891.1
Pentapeptide repeat domain-containing protein.
  
     0.625
GAT67549.1
Methyltransferase.
  
     0.583
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.