STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT64711.1MFS transporter. (556 aa)    
Predicted Functional Partners:
GAT64710.1
lprG protein.
 
     0.946
GAT70534.1
emrB/QacA subfamily drug resistance transporter.
  
    0.677
GAT64709.1
marR family transcriptional regulator.
       0.471
GAT64704.1
Organic solvent ABC transporter substrate-binding protein.
 
     0.454
GAT64703.1
Organic solvent ABC transporter substrate-binding protein.
 
     0.433
GAT70992.1
Transporter.
  
     0.425
GAT68653.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.413
GAT64705.1
Virulence factor Mce.
 
     0.409
GAT69243.1
MFS transporter; Belongs to the major facilitator superfamily.
  
     0.406
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.