STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT64725.1Membrane protein. (212 aa)    
Predicted Functional Partners:
GAT64726.1
Hypothetical protein.
       0.773
GAT64724.1
Acetyltransferase.
       0.757
GAT64961.1
Aminotransferase V.
  
 
 0.620
GAT67610.1
Cysteine desulfurase.
  
 
 0.620
GAT69811.1
Cysteine desulfurase.
  
 
 0.620
GAT64727.1
Hypothetical protein.
       0.594
GAT70597.1
GCN5-related N-acetyltransferase.
  
 
   0.556
GAT68568.1
Nitrogen fixation protein NifU.
  
  
 0.532
GAT64722.1
NUDIX hydrolase.
       0.511
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.511
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.