STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT64729.1Band 7 protein. (568 aa)    
Predicted Functional Partners:
GAT64730.1
Membrane protease subunits stomatin/prohibitin.
 
    
0.884
GAT65932.1
ATPase; Belongs to the AAA ATPase family.
   
 0.884
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.884
GAT66916.1
Zinc protease; Belongs to the peptidase M16 family.
  
 0.676
GAT64551.1
ABC transporter permease.
  
     0.627
GAT64731.1
Sporulation protein.
 
     0.618
GAT66350.1
Membrane protein.
   
 0.592
GAT69058.1
Rhomboid-like protein.
   
 0.592
GAT70844.1
Rhomboid family protein.
   
 0.592
GAT68878.1
Protein kinase.
  
     0.555
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.