Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAT65953.1 | GAT65999.1 | PS9374_01597 | PS9374_01643 | ATP-dependent helicase. | Helicase SNF2. | 0.885 |
GAT65953.1 | GAT70225.1 | PS9374_01597 | PS9374_05905 | ATP-dependent helicase. | Helicase SNF2. | 0.865 |
GAT65953.1 | rplF | PS9374_01597 | PS9374_02060 | ATP-dependent helicase. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.501 |
GAT65953.1 | rpoA | PS9374_01597 | PS9374_02075 | ATP-dependent helicase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.988 |
GAT65953.1 | rpoB | PS9374_01597 | PS9374_02038 | ATP-dependent helicase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.988 |
GAT65953.1 | rpoC | PS9374_01597 | PS9374_02039 | ATP-dependent helicase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.847 |
GAT65953.1 | rpoZ | PS9374_01597 | PS9374_00496 | ATP-dependent helicase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.988 |
GAT65999.1 | GAT65953.1 | PS9374_01643 | PS9374_01597 | Helicase SNF2. | ATP-dependent helicase. | 0.885 |
GAT65999.1 | gmk | PS9374_01643 | PS9374_00497 | Helicase SNF2. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.670 |
GAT65999.1 | rpoA | PS9374_01643 | PS9374_02075 | Helicase SNF2. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.987 |
GAT65999.1 | rpoB | PS9374_01643 | PS9374_02038 | Helicase SNF2. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.987 |
GAT65999.1 | rpoC | PS9374_01643 | PS9374_02039 | Helicase SNF2. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.969 |
GAT65999.1 | rpoZ | PS9374_01643 | PS9374_00496 | Helicase SNF2. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.987 |
GAT70225.1 | GAT65953.1 | PS9374_05905 | PS9374_01597 | Helicase SNF2. | ATP-dependent helicase. | 0.865 |
GAT70225.1 | gmk | PS9374_05905 | PS9374_00497 | Helicase SNF2. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.670 |
GAT70225.1 | rpoA | PS9374_05905 | PS9374_02075 | Helicase SNF2. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.987 |
GAT70225.1 | rpoB | PS9374_05905 | PS9374_02038 | Helicase SNF2. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.987 |
GAT70225.1 | rpoC | PS9374_05905 | PS9374_02039 | Helicase SNF2. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.969 |
GAT70225.1 | rpoZ | PS9374_05905 | PS9374_00496 | Helicase SNF2. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.987 |
gmk | GAT65999.1 | PS9374_00497 | PS9374_01643 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Helicase SNF2. | 0.670 |
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