STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT64988.1Transporter. (154 aa)    
Predicted Functional Partners:
GAT64958.1
Cytochrome C oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.725
GAT64954.1
Cystathionine beta-lyase.
  
     0.706
GAT64955.1
(2Fe-2S)-binding protein.
  
     0.619
GAT64990.1
Glutamine synthetase.
  
 
 0.602
GAT68027.1
Glutaredoxin.
  
     0.583
GAT70087.1
Helicase.
  
     0.571
GAT64989.1
Membrane protein.
       0.534
GAT65041.1
Membrane protein.
  
     0.506
GAT68041.1
Cytochrome C biogenesis protein ResB.
  
     0.492
GAT70073.1
DUF3263 domain-containing protein.
  
     0.491
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.