STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT65042.1Copper resistance protein CopC. (214 aa)    
Predicted Functional Partners:
GAT65041.1
Membrane protein.
 
  
 0.964
GAT65302.1
Membrane protein.
  
    0.911
GAT64890.1
Oxidoreductase.
    
   0.894
GAT68707.1
Copper metallochaperone.
 
    0.891
GAT64404.1
Membrane protein.
  
  
 0.860
GAT68706.1
Peroxidase.
 
  
 0.731
GAT65043.1
XRE family transcriptional regulator.
 
     0.676
GAT66727.1
Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.675
GAT68709.1
Peptidase.
  
    0.653
GAT69502.1
Peptidase.
  
    0.653
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.