STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT65250.1Glycosyl transferase. (448 aa)    
Predicted Functional Partners:
GAT65251.1
Coagulation factor 5/8 type.
 
     0.919
GAT65252.1
Membrane protein.
 
     0.908
GAT65248.1
Transmembrane protein.
 
     0.807
GAT65256.1
Membrane protein.
  
     0.718
GAT65255.1
Acyltransferase.
  
    0.712
GAT65253.1
SAM-dependent methyltransferase.
 
     0.684
glgB
Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.654
GAT69324.1
Mannose-1-phosphate guanyltransferase.
  
 0.642
GAT65254.1
Membrane protein.
 
     0.633
GAT65353.1
Malto-oligosyltrehalose trehalohydrolase.
   
 0.633
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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