STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT65361.1Regulator. (66 aa)    
Predicted Functional Partners:
GAT65360.1
XRE family transcriptional regulator.
 
     0.946
GAT70179.1
XRE family transcriptional regulator.
 
     0.776
GAT64491.1
XRE family transcriptional regulator.
  
     0.775
GAT65930.1
XRE family transcriptional regulator.
 
     0.775
GAT68002.1
Chitinase-promoter-binding protein.
 
     0.775
GAT70612.1
XRE family transcriptional regulator.
  
     0.775
GAT70975.1
XRE family transcriptional regulator.
  
     0.775
GAT66612.1
XRE family transcriptional regulator.
  
     0.774
GAT65063.1
XRE family transcriptional regulator.
  
     0.773
GAT68849.1
Methyltransferase.
  
     0.769
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.