Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAT65346.1 | nusG | PS9374_00979 | PS9374_02029 | Hypothetical protein. | Hypothetical protein; Participates in transcription elongation, termination and antitermination. | 0.879 |
| GAT65346.1 | pnp | PS9374_00979 | PS9374_02569 | Hypothetical protein. | Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.813 |
| GAT65346.1 | rho | PS9374_00979 | PS9374_01041 | Hypothetical protein. | Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.927 |
| GAT65346.1 | rpoA | PS9374_00979 | PS9374_02075 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.970 |
| GAT65346.1 | rpoB | PS9374_00979 | PS9374_02038 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.982 |
| GAT65346.1 | rpoC | PS9374_00979 | PS9374_02039 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.953 |
| GAT65346.1 | rpoZ | PS9374_00979 | PS9374_00496 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.930 |
| GAT68043.1 | nusG | PS9374_03704 | PS9374_02029 | Membrane protein. | Hypothetical protein; Participates in transcription elongation, termination and antitermination. | 0.879 |
| GAT68043.1 | pnp | PS9374_03704 | PS9374_02569 | Membrane protein. | Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.813 |
| GAT68043.1 | rho | PS9374_03704 | PS9374_01041 | Membrane protein. | Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.927 |
| GAT68043.1 | rpoA | PS9374_03704 | PS9374_02075 | Membrane protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.970 |
| GAT68043.1 | rpoB | PS9374_03704 | PS9374_02038 | Membrane protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.982 |
| GAT68043.1 | rpoC | PS9374_03704 | PS9374_02039 | Membrane protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.953 |
| GAT68043.1 | rpoZ | PS9374_03704 | PS9374_00496 | Membrane protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.930 |
| GAT68082.1 | nusG | PS9374_03743 | PS9374_02029 | cAMP-binding protein. | Hypothetical protein; Participates in transcription elongation, termination and antitermination. | 0.879 |
| GAT68082.1 | pnp | PS9374_03743 | PS9374_02569 | cAMP-binding protein. | Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.813 |
| GAT68082.1 | rho | PS9374_03743 | PS9374_01041 | cAMP-binding protein. | Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.927 |
| GAT68082.1 | rpoA | PS9374_03743 | PS9374_02075 | cAMP-binding protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.970 |
| GAT68082.1 | rpoB | PS9374_03743 | PS9374_02038 | cAMP-binding protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.982 |
| GAT68082.1 | rpoC | PS9374_03743 | PS9374_02039 | cAMP-binding protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.953 |
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