STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT65431.1Multidrug ABC transporter ATPase. (377 aa)    
Predicted Functional Partners:
GAT65432.1
ABC transporter.
 
 
  0.874
GAT67688.1
ABC transporter ATP-binding protein.
 
  
 
0.791
GAT68558.1
ABC transporter.
 
 
  0.729
GAT69179.1
ABC transporter.
  
 
  0.684
GAT66154.1
ABC transporter.
 
 0.652
GAT65433.1
Two-component system sensor histidine kinase.
    0.635
GAT66030.1
Multidrug ABC transporter permease.
 
 0.613
GAT70446.1
Multidrug ABC transporter permease.
  
 
  0.601
GAT65439.1
ABC transporter.
 
  0.582
GAT65522.1
ABC transporter.
  
 
  0.580
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.