STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT65435.1tetR family transcriptional regulator. (201 aa)    
Predicted Functional Partners:
GAT65299.1
4-hydroxyacetophenone monooxygenase.
  
     0.570
GAT68131.1
4-hydroxyacetophenone monooxygenase.
  
     0.506
GAT65436.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.501
GAT65807.1
Acyltransferase; Belongs to the long-chain O-acyltransferase family.
  
     0.471
GAT66730.1
Peptidase M23.
  
     0.469
GAT70606.1
Acyltransferase; Belongs to the long-chain O-acyltransferase family.
  
     0.449
GAT69699.1
DNA-directed RNA polymerase sigma-70 factor.
  
     0.438
GAT67074.1
Saccharopine dehydrogenase.
  
     0.436
GAT64932.1
Hypothetical protein.
  
     0.417
GAT65393.1
Family 2 glycosyl transferase.
  
     0.405
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.