Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAT64710.1 | GAT65480.1 | PS9374_00341 | PS9374_01113 | lprG protein. | tesB-like acyl-CoA thioesterase 3. | 0.457 |
| GAT64710.1 | GAT66267.1 | PS9374_00341 | PS9374_01915 | lprG protein. | Hypothetical protein. | 0.508 |
| GAT65480.1 | GAT64710.1 | PS9374_01113 | PS9374_00341 | tesB-like acyl-CoA thioesterase 3. | lprG protein. | 0.457 |
| GAT65480.1 | GAT65482.1 | PS9374_01113 | PS9374_01115 | tesB-like acyl-CoA thioesterase 3. | MBL fold metallo-hydrolase. | 0.496 |
| GAT65480.1 | GAT65484.1 | PS9374_01113 | PS9374_01117 | tesB-like acyl-CoA thioesterase 3. | Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.485 |
| GAT65480.1 | GAT66267.1 | PS9374_01113 | PS9374_01915 | tesB-like acyl-CoA thioesterase 3. | Hypothetical protein. | 0.456 |
| GAT65480.1 | GAT66960.1 | PS9374_01113 | PS9374_02612 | tesB-like acyl-CoA thioesterase 3. | merR family transcriptional regulator. | 0.483 |
| GAT65480.1 | GAT67607.1 | PS9374_01113 | PS9374_03265 | tesB-like acyl-CoA thioesterase 3. | Hypothetical protein. | 0.468 |
| GAT65480.1 | GAT68534.1 | PS9374_01113 | PS9374_04199 | tesB-like acyl-CoA thioesterase 3. | N-acetyltransferase GCN5. | 0.464 |
| GAT65480.1 | GAT70363.1 | PS9374_01113 | PS9374_06045 | tesB-like acyl-CoA thioesterase 3. | AP endonuclease. | 0.758 |
| GAT65480.1 | murI | PS9374_01113 | PS9374_01114 | tesB-like acyl-CoA thioesterase 3. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.543 |
| GAT65480.1 | rph | PS9374_01113 | PS9374_01116 | tesB-like acyl-CoA thioesterase 3. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.485 |
| GAT65482.1 | GAT65480.1 | PS9374_01115 | PS9374_01113 | MBL fold metallo-hydrolase. | tesB-like acyl-CoA thioesterase 3. | 0.496 |
| GAT65482.1 | GAT65484.1 | PS9374_01115 | PS9374_01117 | MBL fold metallo-hydrolase. | Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.867 |
| GAT65482.1 | murI | PS9374_01115 | PS9374_01114 | MBL fold metallo-hydrolase. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.813 |
| GAT65482.1 | rph | PS9374_01115 | PS9374_01116 | MBL fold metallo-hydrolase. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.882 |
| GAT65484.1 | GAT65480.1 | PS9374_01117 | PS9374_01113 | Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | tesB-like acyl-CoA thioesterase 3. | 0.485 |
| GAT65484.1 | GAT65482.1 | PS9374_01117 | PS9374_01115 | Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | MBL fold metallo-hydrolase. | 0.867 |
| GAT65484.1 | murI | PS9374_01117 | PS9374_01114 | Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.943 |
| GAT65484.1 | rph | PS9374_01117 | PS9374_01116 | Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.995 |
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