STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT65528.1Allantoate amidohydrolase. (436 aa)    
Predicted Functional Partners:
GAT65529.1
N-formimino-L-glutamate deiminase.
    0.974
GAT64897.1
Allantoinase.
 
 
 0.885
hutI
Imidazolonepropionase.
 
     0.829
pyrD-2
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.766
gltD
Dihydropyrimidine dehydrogenase subunit A.
 
 
  0.730
GAT65925.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
   
  0.696
GAT65512.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
   
  0.689
GAT66202.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
   
  0.689
GAT67476.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
   
  0.677
GAT70679.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
   
  0.677
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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