STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT65541.1Transposase. (76 aa)    
Predicted Functional Partners:
GAT71461.1
Transposase.
 
     0.776
GAT67326.1
Endonuclease DDE.
  
     0.775
GAT67415.1
Membrane protein.
  
  
 0.683
GAT68880.1
Bacteriophage resistance gene pglY.
 
  
 0.673
GAT68505.1
Bacteriophage resistance gene pglY.
 
  
 0.641
GAT68516.1
ATPase.
  
    0.604
GAT65540.1
Alginate O-acetyltransferase.
       0.596
GAT67835.1
Transposase.
  
     0.556
GAT65534.1
Transposase.
  
     0.555
GAT65539.1
Alginate O-acetyltransferase; Belongs to the membrane-bound acyltransferase family.
       0.536
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.