Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAT64541.1 | GAT66028.1 | PS9374_00171 | PS9374_01672 | Nuclease-like protein. | Thymidine kinase. | 0.809 |
GAT64541.1 | GAT66235.1 | PS9374_00171 | PS9374_01882 | Nuclease-like protein. | Thymidylate synthase. | 0.502 |
GAT64541.1 | GAT66566.1 | PS9374_00171 | PS9374_02216 | Nuclease-like protein. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.780 |
GAT64541.1 | GAT66567.1 | PS9374_00171 | PS9374_02217 | Nuclease-like protein. | Pyrimidine-nucleoside phosphorylase. | 0.786 |
GAT64541.1 | GAT70845.1 | PS9374_00171 | PS9374_06533 | Nuclease-like protein. | Nucleotidase; Belongs to the 5'-nucleotidase family. | 0.773 |
GAT66028.1 | GAT64541.1 | PS9374_01672 | PS9374_00171 | Thymidine kinase. | Nuclease-like protein. | 0.809 |
GAT66028.1 | GAT66235.1 | PS9374_01672 | PS9374_01882 | Thymidine kinase. | Thymidylate synthase. | 0.960 |
GAT66028.1 | GAT66566.1 | PS9374_01672 | PS9374_02216 | Thymidine kinase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.950 |
GAT66028.1 | GAT66567.1 | PS9374_01672 | PS9374_02217 | Thymidine kinase. | Pyrimidine-nucleoside phosphorylase. | 0.911 |
GAT66028.1 | GAT66577.1 | PS9374_01672 | PS9374_02227 | Thymidine kinase. | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.867 |
GAT66028.1 | GAT70845.1 | PS9374_01672 | PS9374_06533 | Thymidine kinase. | Nucleotidase; Belongs to the 5'-nucleotidase family. | 0.801 |
GAT66028.1 | dut | PS9374_01672 | PS9374_01777 | Thymidine kinase. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.977 |
GAT66028.1 | prfA | PS9374_01672 | PS9374_01043 | Thymidine kinase. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.876 |
GAT66028.1 | thyX | PS9374_01672 | PS9374_04979 | Thymidine kinase. | Thymidylate synthase thyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.879 |
GAT66028.1 | tmk | PS9374_01672 | PS9374_04924 | Thymidine kinase. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.946 |
GAT66235.1 | GAT64541.1 | PS9374_01882 | PS9374_00171 | Thymidylate synthase. | Nuclease-like protein. | 0.502 |
GAT66235.1 | GAT66028.1 | PS9374_01882 | PS9374_01672 | Thymidylate synthase. | Thymidine kinase. | 0.960 |
GAT66235.1 | GAT70845.1 | PS9374_01882 | PS9374_06533 | Thymidylate synthase. | Nucleotidase; Belongs to the 5'-nucleotidase family. | 0.451 |
GAT66235.1 | dut | PS9374_01882 | PS9374_01777 | Thymidylate synthase. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.954 |
GAT66235.1 | thyX | PS9374_01882 | PS9374_04979 | Thymidylate synthase. | Thymidylate synthase thyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.760 |
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