STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66043.1MFS transporter. (424 aa)    
Predicted Functional Partners:
GAT67217.1
MFS transporter.
 
     0.743
GAT71112.1
Major facilitator transporter.
 
     0.735
GAT66354.1
MFS transporter permease.
  
     0.705
GAT68362.1
Peptide ABC transporter substrate-binding protein.
  
     0.590
GAT68363.1
ABC transporter permease.
  
     0.519
GAT66041.1
Hypothetical protein.
       0.488
GAT66042.1
mazF family transcriptional regulator; Toxic component of a type II toxin-antitoxin (TA) system.
       0.488
GAT70960.1
Acetyltransferase.
   
    0.457
GAT65789.1
Dipeptidyl aminopeptidase.
  
     0.442
GAT66145.1
Peptidase S9.
  
     0.436
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.