Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAT65418.1 | GAT66112.1 | PS9374_01051 | PS9374_01756 | ATP synthase I. | Hydrolase. | 0.558 |
GAT65418.1 | GAT70093.1 | PS9374_01051 | PS9374_05773 | ATP synthase I. | Molecular chaperone Hsp90. | 0.442 |
GAT65418.1 | GAT70523.1 | PS9374_01051 | PS9374_06209 | ATP synthase I. | Hypothetical protein. | 0.582 |
GAT65896.1 | GAT66112.1 | PS9374_01540 | PS9374_01756 | Membrane protein. | Hydrolase. | 0.517 |
GAT66112.1 | GAT65418.1 | PS9374_01756 | PS9374_01051 | Hydrolase. | ATP synthase I. | 0.558 |
GAT66112.1 | GAT65896.1 | PS9374_01756 | PS9374_01540 | Hydrolase. | Membrane protein. | 0.517 |
GAT66112.1 | GAT67702.1 | PS9374_01756 | PS9374_03360 | Hydrolase. | Peptidase. | 0.495 |
GAT66112.1 | GAT67704.1 | PS9374_01756 | PS9374_03362 | Hydrolase. | Lipoprotein. | 0.487 |
GAT66112.1 | GAT67706.1 | PS9374_01756 | PS9374_03364 | Hydrolase. | Peptidase. | 0.494 |
GAT66112.1 | GAT68668.1 | PS9374_01756 | PS9374_04333 | Hydrolase. | Forkhead-associated protein. | 0.601 |
GAT66112.1 | GAT68800.1 | PS9374_01756 | PS9374_04465 | Hydrolase. | Hypothetical protein. | 0.594 |
GAT66112.1 | GAT70093.1 | PS9374_01756 | PS9374_05773 | Hydrolase. | Molecular chaperone Hsp90. | 0.582 |
GAT66112.1 | GAT70523.1 | PS9374_01756 | PS9374_06209 | Hydrolase. | Hypothetical protein. | 0.535 |
GAT66112.1 | GAT71024.1 | PS9374_01756 | PS9374_06715 | Hydrolase. | DNA-binding protein. | 0.538 |
GAT67702.1 | GAT66112.1 | PS9374_03360 | PS9374_01756 | Peptidase. | Hydrolase. | 0.495 |
GAT67702.1 | GAT68668.1 | PS9374_03360 | PS9374_04333 | Peptidase. | Forkhead-associated protein. | 0.723 |
GAT67704.1 | GAT66112.1 | PS9374_03362 | PS9374_01756 | Lipoprotein. | Hydrolase. | 0.487 |
GAT67704.1 | GAT68668.1 | PS9374_03362 | PS9374_04333 | Lipoprotein. | Forkhead-associated protein. | 0.688 |
GAT67706.1 | GAT66112.1 | PS9374_03364 | PS9374_01756 | Peptidase. | Hydrolase. | 0.494 |
GAT67706.1 | GAT68668.1 | PS9374_03364 | PS9374_04333 | Peptidase. | Forkhead-associated protein. | 0.665 |
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