STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66124.1F420-dependent oxidoreductase. (307 aa)    
Predicted Functional Partners:
GAT67109.1
AMP-dependent synthetase.
   
 0.802
GAT65153.1
F420-0--gamma-glutamyl ligase.
 
  
 0.781
GAT68624.1
Luciferase-like monooxygenase.
  
     0.761
GAT70308.1
Nitroreductase.
  
  
 0.741
GAT65154.1
2-phospho-L-lactate transferase.
 
   
 0.740
GAT65009.1
N5,N10-methylene tetrahydromethanopterin reductase.
  
     0.682
GAT69582.1
PPOX class F420-dependent enzyme.
  
     0.675
GAT65714.1
F420-dependent oxidoreductase.
  
     0.673
GAT70672.1
Non-ribosomal peptide synthetase.
   
 0.659
GAT67689.1
ABC transporter substrate-binding protein.
 
 
 
  0.657
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.