STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66244.1Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein. (347 aa)    
Predicted Functional Partners:
GAT66245.1
ABC transporter.
  
  0.962
GAT66154.1
ABC transporter.
 
 0.912
GAT66030.1
Multidrug ABC transporter permease.
 
 0.862
GAT69419.1
ABC transporter permease.
 
 0.823
GAT65522.1
ABC transporter.
  
 
  0.778
GAT68473.1
ABC transporter permease.
  
 
  0.770
GAT69409.1
ABC transporter ATP-binding protein.
 
    
0.716
GAT66246.1
Transcriptional regulator.
  
     0.579
GAT64405.1
ABC transporter permease.
   
  0.527
GAT66437.1
Membrane protein.
   
  0.527
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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