GAT66245.1 protein (Planomonospora sphaerica)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

GAT66245.1

ABC transporter. (292 aa)

Predicted Functional Partners:

GAT70063.1

0.991

GAT66244.1

0.962

GAT66153.1

0.840

GAT66031.1

0.839

GAT69420.1

0.836

GAT65523.1

0.830

GAT68474.1

0.815

GAT66030.1

0.751

GAT66154.1

0.704

GAT65439.1

0.633

Your Current Organism:

Planomonospora sphaerica

NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GAT65439.1	GAT65523.1	PS9374_01072	PS9374_01156	ABC transporter.	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein.	0.507
GAT65439.1	GAT66030.1	PS9374_01072	PS9374_01674	ABC transporter.	Multidrug ABC transporter permease.	0.429
GAT65439.1	GAT66031.1	PS9374_01072	PS9374_01675	ABC transporter.	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein.	0.517
GAT65439.1	GAT66153.1	PS9374_01072	PS9374_01797	ABC transporter.	ABC transporter.	0.510
GAT65439.1	GAT66154.1	PS9374_01072	PS9374_01798	ABC transporter.	ABC transporter.	0.427
GAT65439.1	GAT66244.1	PS9374_01072	PS9374_01891	ABC transporter.	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein.	0.515
GAT65439.1	GAT66245.1	PS9374_01072	PS9374_01892	ABC transporter.	ABC transporter.	0.633
GAT65439.1	GAT68474.1	PS9374_01072	PS9374_04139	ABC transporter.	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein.	0.455
GAT65523.1	GAT65439.1	PS9374_01156	PS9374_01072	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein.	ABC transporter.	0.507
GAT65523.1	GAT66030.1	PS9374_01156	PS9374_01674	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein.	Multidrug ABC transporter permease.	0.855
GAT65523.1	GAT66154.1	PS9374_01156	PS9374_01798	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein.	ABC transporter.	0.908
GAT65523.1	GAT66245.1	PS9374_01156	PS9374_01892	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein.	ABC transporter.	0.830
GAT66030.1	GAT65439.1	PS9374_01674	PS9374_01072	Multidrug ABC transporter permease.	ABC transporter.	0.429
GAT66030.1	GAT65523.1	PS9374_01674	PS9374_01156	Multidrug ABC transporter permease.	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein.	0.855
GAT66030.1	GAT66031.1	PS9374_01674	PS9374_01675	Multidrug ABC transporter permease.	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein.	0.933
GAT66030.1	GAT66153.1	PS9374_01674	PS9374_01797	Multidrug ABC transporter permease.	ABC transporter.	0.865
GAT66030.1	GAT66154.1	PS9374_01674	PS9374_01798	Multidrug ABC transporter permease.	ABC transporter.	0.496
GAT66030.1	GAT66244.1	PS9374_01674	PS9374_01891	Multidrug ABC transporter permease.	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein.	0.862
GAT66030.1	GAT66245.1	PS9374_01674	PS9374_01892	Multidrug ABC transporter permease.	ABC transporter.	0.751
GAT66030.1	GAT68474.1	PS9374_01674	PS9374_04139	Multidrug ABC transporter permease.	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein.	0.839