Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAT64705.1 | GAT64706.1 | PS9374_00336 | PS9374_00337 | Virulence factor Mce. | Organic solvent ABC transporter substrate-binding protein. | 0.978 |
| GAT64705.1 | GAT66288.1 | PS9374_00336 | PS9374_01936 | Virulence factor Mce. | Lipolytic protein G-D-S-L. | 0.564 |
| GAT64706.1 | GAT64705.1 | PS9374_00337 | PS9374_00336 | Organic solvent ABC transporter substrate-binding protein. | Virulence factor Mce. | 0.978 |
| GAT64706.1 | GAT66288.1 | PS9374_00337 | PS9374_01936 | Organic solvent ABC transporter substrate-binding protein. | Lipolytic protein G-D-S-L. | 0.540 |
| GAT65085.1 | GAT65770.1 | PS9374_00717 | PS9374_01410 | Membrane protein. | Oxidoreductase. | 0.533 |
| GAT65085.1 | GAT66288.1 | PS9374_00717 | PS9374_01936 | Membrane protein. | Lipolytic protein G-D-S-L. | 0.690 |
| GAT65770.1 | GAT65085.1 | PS9374_01410 | PS9374_00717 | Oxidoreductase. | Membrane protein. | 0.533 |
| GAT65770.1 | GAT66288.1 | PS9374_01410 | PS9374_01936 | Oxidoreductase. | Lipolytic protein G-D-S-L. | 0.628 |
| GAT65770.1 | GAT70963.1 | PS9374_01410 | PS9374_06652 | Oxidoreductase. | Transcriptional regulator. | 0.494 |
| GAT66288.1 | GAT64705.1 | PS9374_01936 | PS9374_00336 | Lipolytic protein G-D-S-L. | Virulence factor Mce. | 0.564 |
| GAT66288.1 | GAT64706.1 | PS9374_01936 | PS9374_00337 | Lipolytic protein G-D-S-L. | Organic solvent ABC transporter substrate-binding protein. | 0.540 |
| GAT66288.1 | GAT65085.1 | PS9374_01936 | PS9374_00717 | Lipolytic protein G-D-S-L. | Membrane protein. | 0.690 |
| GAT66288.1 | GAT65770.1 | PS9374_01936 | PS9374_01410 | Lipolytic protein G-D-S-L. | Oxidoreductase. | 0.628 |
| GAT66288.1 | GAT66293.1 | PS9374_01936 | PS9374_01941 | Lipolytic protein G-D-S-L. | Endoglucanase. | 0.620 |
| GAT66288.1 | GAT66974.1 | PS9374_01936 | PS9374_02626 | Lipolytic protein G-D-S-L. | Thioesterase superfamily protein. | 0.552 |
| GAT66288.1 | GAT68776.1 | PS9374_01936 | PS9374_04441 | Lipolytic protein G-D-S-L. | Hypothetical protein; T9SS C-terminal target domain-containing protein. | 0.610 |
| GAT66288.1 | GAT70501.1 | PS9374_01936 | PS9374_06187 | Lipolytic protein G-D-S-L. | alpha-L-arabinofuranosidase. | 0.573 |
| GAT66288.1 | GAT70717.1 | PS9374_01936 | PS9374_06403 | Lipolytic protein G-D-S-L. | Oxidoreductase. | 0.585 |
| GAT66288.1 | GAT70963.1 | PS9374_01936 | PS9374_06652 | Lipolytic protein G-D-S-L. | Transcriptional regulator. | 0.566 |
| GAT66293.1 | GAT66288.1 | PS9374_01941 | PS9374_01936 | Endoglucanase. | Lipolytic protein G-D-S-L. | 0.620 |
page 1 of 2