STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66321.1Glyoxalase. (161 aa)    
Predicted Functional Partners:
GAT68301.1
Transcriptional regulator.
   
    0.633
cobB-2
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
  
    0.629
GAT67172.1
hxlR family transcriptional regulator.
  
    0.623
GAT67991.1
hxlR family transcriptional regulator.
   
    0.568
GAT71234.1
Transcriptional regulator.
   
    0.568
GAT66696.1
Transcriptional regulator.
  
    0.551
GAT67547.1
3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.524
GAT68560.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
 
 0.515
GAT65413.1
Cell envelope-related transcriptional attenuator.
   
    0.491
GAT68202.1
araC family transcriptional regulator.
   
    0.491
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.