STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66454.112-oxophytodienoate reductase. (358 aa)    
Predicted Functional Partners:
GAT67125.1
NADH:flavin oxidoreductase.
 
   
  0.911
GAT64754.1
Glutamate synthase.
    
 0.884
GAT69948.1
Fumarate reductase.
   
  0.842
GAT67614.1
Electron transfer flavoprotein subunit beta.
  
 
 0.741
GAT66682.1
Oxidoreductase.
  
  
 
0.713
GAT66013.1
acetyl-CoA carboxyltransferase.
    
  0.694
GAT69641.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.689
GAT69955.1
3-ketosteroid-delta-1-dehydrogenase.
   
  0.618
GAT67613.1
Electron transfer flavoprotein subunit alpha.
   
 
 0.603
narY
Nitrate reductase subunit beta.
    
   0.586
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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