STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66497.1Glucose-1-phosphate thymidylyltransferase. (355 aa)    
Predicted Functional Partners:
GAT66498.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 0.999
GAT69324.1
Mannose-1-phosphate guanyltransferase.
 
 
0.972
GAT65151.1
dTDP-4-dehydrorhamnose reductase.
 
  
 0.969
GAT65121.1
UDP-glucose 6-dehydrogenase.
  
 
 0.926
GAT64457.1
Epimerase.
 
 
 0.890
GAT70283.1
UTP--glucose-1-phosphate uridylyltransferase.
 
 
0.885
GAT70618.1
Phosphoglucomutase.
    
 0.860
GAT67729.1
UDP-glucose 4-epimerase.
 
 0.851
GAT65146.1
GDP-mannose pyrophosphorylase.
 
 
0.829
GAT68111.1
Polysaccharide biosynthesis protein.
  
  
 0.826
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.