STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66598.1Exo-1,4-beta-glucosidase. (951 aa)    
Predicted Functional Partners:
GAT66583.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.890
GAT67692.1
Glycosyl hydrolase family 5.
  
  
  0.798
GAT66599.1
lacI family transcriptional regulator.
 
  
  0.785
GAT65883.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
  
  
 0.780
GAT66289.1
Beta-1 4-xylanase-like protein.
 
  
 0.780
GAT68190.1
Cellobiohydrolase A-like protein; Belongs to the glycosyl hydrolase family 6.
  
  
  0.752
GAT66291.1
Endoglucanase.
  
  
  0.743
GAT70125.1
Endoglucanase.
  
  
  0.712
GAT68142.1
Endo-1,4-beta-xylanase.
 
  
 0.708
GAT66290.1
Beta-mannosidase.
  
  
  0.705
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.